Left reads: Input : 293526 Mapped : 236836 (80.7% of input) of these: 21108 ( 8.9%) have multiple alignments (3945 have >20) Right reads: Input : 293526 Mapped : 242771 (82.7% of input) of these: 21408 ( 8.8%) have multiple alignments (3945 have >20) 81.7% overall read mapping rate. Aligned pairs: 209300 of these: 18789 ( 9.0%) have multiple alignments 4416 ( 2.1%) are discordant alignments 69.8% concordant pair alignment rate.