Left reads: Input : 267780 Mapped : 220411 (82.3% of input) of these: 6888 ( 3.1%) have multiple alignments (594 have >20) Right reads: Input : 267780 Mapped : 217890 (81.4% of input) of these: 6766 ( 3.1%) have multiple alignments (594 have >20) 81.8% overall read mapping rate. Aligned pairs: 187134 of these: 5818 ( 3.1%) have multiple alignments 3562 ( 1.9%) are discordant alignments 68.6% concordant pair alignment rate.