Left reads: Input : 298354 Mapped : 251587 (84.3% of input) of these: 6618 ( 2.6%) have multiple alignments (511 have >20) Right reads: Input : 298354 Mapped : 240406 (80.6% of input) of these: 6322 ( 2.6%) have multiple alignments (511 have >20) 82.5% overall read mapping rate. Aligned pairs: 212342 of these: 5654 ( 2.7%) have multiple alignments 4188 ( 2.0%) are discordant alignments 69.8% concordant pair alignment rate.