Left reads: Input : 330127 Mapped : 277180 (84.0% of input) of these: 53421 (19.3%) have multiple alignments (2594 have >20) Right reads: Input : 330127 Mapped : 241679 (73.2% of input) of these: 47673 (19.7%) have multiple alignments (2594 have >20) 78.6% overall read mapping rate. Aligned pairs: 212901 of these: 43010 (20.2%) have multiple alignments 7472 ( 3.5%) are discordant alignments 62.2% concordant pair alignment rate.