Left reads: Input : 200767 Mapped : 174645 (87.0% of input) of these: 9004 ( 5.2%) have multiple alignments (1526 have >20) Right reads: Input : 200767 Mapped : 167988 (83.7% of input) of these: 8570 ( 5.1%) have multiple alignments (1526 have >20) 85.3% overall read mapping rate. Aligned pairs: 153693 of these: 7814 ( 5.1%) have multiple alignments 4779 ( 3.1%) are discordant alignments 74.2% concordant pair alignment rate.