Left reads: Input : 1613659 Mapped : 1470437 (91.1% of input) of these: 241363 (16.4%) have multiple alignments (38525 have >20) Right reads: Input : 1613659 Mapped : 1431898 (88.7% of input) of these: 238566 (16.7%) have multiple alignments (38526 have >20) 89.9% overall read mapping rate. Aligned pairs: 1338327 of these: 221141 (16.5%) have multiple alignments 18111 ( 1.4%) are discordant alignments 81.8% concordant pair alignment rate.