Left reads: Input : 718125 Mapped : 606762 (84.5% of input) of these: 127041 (20.9%) have multiple alignments (33919 have >20) Right reads: Input : 718125 Mapped : 599585 (83.5% of input) of these: 126642 (21.1%) have multiple alignments (33919 have >20) 84.0% overall read mapping rate. Aligned pairs: 523595 of these: 110760 (21.2%) have multiple alignments 19056 ( 3.6%) are discordant alignments 70.3% concordant pair alignment rate.