Left reads: Input : 1336488 Mapped : 1146667 (85.8% of input) of these: 194313 (16.9%) have multiple alignments (20458 have >20) Right reads: Input : 1336488 Mapped : 1124876 (84.2% of input) of these: 192768 (17.1%) have multiple alignments (20458 have >20) 85.0% overall read mapping rate. Aligned pairs: 1021847 of these: 175999 (17.2%) have multiple alignments 18560 ( 1.8%) are discordant alignments 75.1% concordant pair alignment rate.