Left reads: Input : 116860 Mapped : 89758 (76.8% of input) of these: 4316 ( 4.8%) have multiple alignments (175 have >20) Right reads: Input : 116860 Mapped : 87173 (74.6% of input) of these: 4301 ( 4.9%) have multiple alignments (175 have >20) 75.7% overall read mapping rate. Aligned pairs: 72262 of these: 3446 ( 4.8%) have multiple alignments 1397 ( 1.9%) are discordant alignments 60.6% concordant pair alignment rate.