Left reads: Input : 348173 Mapped : 308468 (88.6% of input) of these: 72808 (23.6%) have multiple alignments (13348 have >20) Right reads: Input : 348173 Mapped : 307144 (88.2% of input) of these: 72881 (23.7%) have multiple alignments (13348 have >20) 88.4% overall read mapping rate. Aligned pairs: 278427 of these: 66356 (23.8%) have multiple alignments 8850 ( 3.2%) are discordant alignments 77.4% concordant pair alignment rate.