Left reads: Input : 1149025 Mapped : 953006 (82.9% of input) of these: 140149 (14.7%) have multiple alignments (15677 have >20) Right reads: Input : 1149025 Mapped : 931960 (81.1% of input) of these: 138515 (14.9%) have multiple alignments (15677 have >20) 82.0% overall read mapping rate. Aligned pairs: 843975 of these: 126379 (15.0%) have multiple alignments 16128 ( 1.9%) are discordant alignments 72.0% concordant pair alignment rate.