Left reads:
          Input     :   1396705
           Mapped   :   1241258 (88.9% of input)
            of these:    111867 ( 9.0%) have multiple alignments (13081 have >20)
Right reads:
          Input     :   1396705
           Mapped   :   1209485 (86.6% of input)
            of these:    110382 ( 9.1%) have multiple alignments (13081 have >20)
87.7% overall read mapping rate.

Aligned pairs:   1108276
     of these:    102352 ( 9.2%) have multiple alignments
                   20506 ( 1.9%) are discordant alignments
77.9% concordant pair alignment rate.