Left reads: Input : 595801 Mapped : 524490 (88.0% of input) of these: 40477 ( 7.7%) have multiple alignments (6147 have >20) Right reads: Input : 595801 Mapped : 508025 (85.3% of input) of these: 39594 ( 7.8%) have multiple alignments (6147 have >20) 86.6% overall read mapping rate. Aligned pairs: 466968 of these: 36566 ( 7.8%) have multiple alignments 10081 ( 2.2%) are discordant alignments 76.7% concordant pair alignment rate.