Left reads: Input : 1321770 Mapped : 1148424 (86.9% of input) of these: 170855 (14.9%) have multiple alignments (24739 have >20) Right reads: Input : 1321770 Mapped : 1107661 (83.8% of input) of these: 167469 (15.1%) have multiple alignments (24739 have >20) 85.3% overall read mapping rate. Aligned pairs: 1013475 of these: 154144 (15.2%) have multiple alignments 20635 ( 2.0%) are discordant alignments 75.1% concordant pair alignment rate.