Left reads: Input : 621016 Mapped : 529408 (85.2% of input) of these: 26511 ( 5.0%) have multiple alignments (2004 have >20) Right reads: Input : 621016 Mapped : 505509 (81.4% of input) of these: 25547 ( 5.1%) have multiple alignments (2004 have >20) 83.3% overall read mapping rate. Aligned pairs: 448601 of these: 22885 ( 5.1%) have multiple alignments 11009 ( 2.5%) are discordant alignments 70.5% concordant pair alignment rate.