Left reads: Input : 822082 Mapped : 739140 (89.9% of input) of these: 107950 (14.6%) have multiple alignments (19413 have >20) Right reads: Input : 822082 Mapped : 700594 (85.2% of input) of these: 104437 (14.9%) have multiple alignments (19413 have >20) 87.6% overall read mapping rate. Aligned pairs: 645644 of these: 96376 (14.9%) have multiple alignments 13439 ( 2.1%) are discordant alignments 76.9% concordant pair alignment rate.