Left reads: Input : 173345 Mapped : 155472 (89.7% of input) of these: 14381 ( 9.2%) have multiple alignments (1386 have >20) Right reads: Input : 173345 Mapped : 148424 (85.6% of input) of these: 13949 ( 9.4%) have multiple alignments (1386 have >20) 87.7% overall read mapping rate. Aligned pairs: 136580 of these: 12934 ( 9.5%) have multiple alignments 2842 ( 2.1%) are discordant alignments 77.2% concordant pair alignment rate.