Left reads: Input : 646653 Mapped : 563766 (87.2% of input) of these: 101465 (18.0%) have multiple alignments (19615 have >20) Right reads: Input : 646653 Mapped : 511656 (79.1% of input) of these: 93108 (18.2%) have multiple alignments (19615 have >20) 83.2% overall read mapping rate. Aligned pairs: 463598 of these: 84466 (18.2%) have multiple alignments 10971 ( 2.4%) are discordant alignments 70.0% concordant pair alignment rate.