Left reads: Input : 559051 Mapped : 454135 (81.2% of input) of these: 36493 ( 8.0%) have multiple alignments (3682 have >20) Right reads: Input : 559051 Mapped : 445174 (79.6% of input) of these: 36275 ( 8.1%) have multiple alignments (3682 have >20) 80.4% overall read mapping rate. Aligned pairs: 386617 of these: 30484 ( 7.9%) have multiple alignments 2853 ( 0.7%) are discordant alignments 68.6% concordant pair alignment rate.