Left reads: Input : 459759 Mapped : 384381 (83.6% of input) of these: 18417 ( 4.8%) have multiple alignments (2171 have >20) Right reads: Input : 459759 Mapped : 375950 (81.8% of input) of these: 18196 ( 4.8%) have multiple alignments (2171 have >20) 82.7% overall read mapping rate. Aligned pairs: 337884 of these: 16446 ( 4.9%) have multiple alignments 2651 ( 0.8%) are discordant alignments 72.9% concordant pair alignment rate.