Left reads: Input : 792618 Mapped : 726770 (91.7% of input) of these: 112489 (15.5%) have multiple alignments (19417 have >20) Right reads: Input : 792618 Mapped : 686363 (86.6% of input) of these: 108401 (15.8%) have multiple alignments (19417 have >20) 89.1% overall read mapping rate. Aligned pairs: 642328 of these: 100241 (15.6%) have multiple alignments 11628 ( 1.8%) are discordant alignments 79.6% concordant pair alignment rate.