Left reads: Input : 1369735 Mapped : 1187735 (86.7% of input) of these: 181964 (15.3%) have multiple alignments (25674 have >20) Right reads: Input : 1369735 Mapped : 1158676 (84.6% of input) of these: 179594 (15.5%) have multiple alignments (25612 have >20) 85.7% overall read mapping rate. Aligned pairs: 1062728 of these: 165783 (15.6%) have multiple alignments 18141 ( 1.7%) are discordant alignments 76.3% concordant pair alignment rate.