Left reads: Input : 432182 Mapped : 365036 (84.5% of input) of these: 12203 ( 3.3%) have multiple alignments (1013 have >20) Right reads: Input : 432182 Mapped : 356683 (82.5% of input) of these: 11886 ( 3.3%) have multiple alignments (1013 have >20) 83.5% overall read mapping rate. Aligned pairs: 316334 of these: 10518 ( 3.3%) have multiple alignments 5242 ( 1.7%) are discordant alignments 72.0% concordant pair alignment rate.