Left reads: Input : 358215 Mapped : 299993 (83.7% of input) of these: 11174 ( 3.7%) have multiple alignments (1270 have >20) Right reads: Input : 358215 Mapped : 287470 (80.3% of input) of these: 10667 ( 3.7%) have multiple alignments (1270 have >20) 82.0% overall read mapping rate. Aligned pairs: 253271 of these: 9484 ( 3.7%) have multiple alignments 5848 ( 2.3%) are discordant alignments 69.1% concordant pair alignment rate.