Left reads: Input : 321859 Mapped : 275137 (85.5% of input) of these: 8375 ( 3.0%) have multiple alignments (525 have >20) Right reads: Input : 321859 Mapped : 261799 (81.3% of input) of these: 8044 ( 3.1%) have multiple alignments (525 have >20) 83.4% overall read mapping rate. Aligned pairs: 234425 of these: 7110 ( 3.0%) have multiple alignments 4082 ( 1.7%) are discordant alignments 71.6% concordant pair alignment rate.