Left reads: Input : 612734 Mapped : 531514 (86.7% of input) of these: 184202 (34.7%) have multiple alignments (49227 have >20) Right reads: Input : 612734 Mapped : 515817 (84.2% of input) of these: 180329 (35.0%) have multiple alignments (49227 have >20) 85.5% overall read mapping rate. Aligned pairs: 457861 of these: 161963 (35.4%) have multiple alignments 20149 ( 4.4%) are discordant alignments 71.4% concordant pair alignment rate.