Left reads: Input : 1166818 Mapped : 997670 (85.5% of input) of these: 316162 (31.7%) have multiple alignments (57772 have >20) Right reads: Input : 1166818 Mapped : 982464 (84.2% of input) of these: 313530 (31.9%) have multiple alignments (57772 have >20) 84.9% overall read mapping rate. Aligned pairs: 889392 of these: 286338 (32.2%) have multiple alignments 21828 ( 2.5%) are discordant alignments 74.4% concordant pair alignment rate.