Left reads: Input : 581777 Mapped : 473967 (81.5% of input) of these: 15406 ( 3.3%) have multiple alignments (1901 have >20) Right reads: Input : 581777 Mapped : 474352 (81.5% of input) of these: 15412 ( 3.2%) have multiple alignments (1901 have >20) 81.5% overall read mapping rate. Aligned pairs: 430726 of these: 14047 ( 3.3%) have multiple alignments 5641 ( 1.3%) are discordant alignments 73.1% concordant pair alignment rate.