Left reads: Input : 723312 Mapped : 603424 (83.4% of input) of these: 82040 (13.6%) have multiple alignments (18776 have >20) Right reads: Input : 723312 Mapped : 573641 (79.3% of input) of these: 78606 (13.7%) have multiple alignments (18776 have >20) 81.4% overall read mapping rate. Aligned pairs: 502218 of these: 69501 (13.8%) have multiple alignments 15557 ( 3.1%) are discordant alignments 67.3% concordant pair alignment rate.