Left reads: Input : 1252762 Mapped : 1032538 (82.4% of input) of these: 50417 ( 4.9%) have multiple alignments (4993 have >20) Right reads: Input : 1252762 Mapped : 1017476 (81.2% of input) of these: 50221 ( 4.9%) have multiple alignments (4993 have >20) 81.8% overall read mapping rate. Aligned pairs: 928323 of these: 46198 ( 5.0%) have multiple alignments 17433 ( 1.9%) are discordant alignments 72.7% concordant pair alignment rate.