Left reads: Input : 551892 Mapped : 461236 (83.6% of input) of these: 97110 (21.1%) have multiple alignments (30351 have >20) Right reads: Input : 551892 Mapped : 443764 (80.4% of input) of these: 94890 (21.4%) have multiple alignments (30261 have >20) 82.0% overall read mapping rate. Aligned pairs: 385361 of these: 82031 (21.3%) have multiple alignments 16454 ( 4.3%) are discordant alignments 66.8% concordant pair alignment rate.