Left reads: Input : 953946 Mapped : 832107 (87.2% of input) of these: 161490 (19.4%) have multiple alignments (31738 have >20) Right reads: Input : 953946 Mapped : 798958 (83.8% of input) of these: 158033 (19.8%) have multiple alignments (31738 have >20) 85.5% overall read mapping rate. Aligned pairs: 728401 of these: 142921 (19.6%) have multiple alignments 22055 ( 3.0%) are discordant alignments 74.0% concordant pair alignment rate.