Left reads: Input : 320943 Mapped : 267559 (83.4% of input) of these: 14653 ( 5.5%) have multiple alignments (649 have >20) Right reads: Input : 320943 Mapped : 260763 (81.2% of input) of these: 14273 ( 5.5%) have multiple alignments (649 have >20) 82.3% overall read mapping rate. Aligned pairs: 228104 of these: 12635 ( 5.5%) have multiple alignments 4879 ( 2.1%) are discordant alignments 69.6% concordant pair alignment rate.