Left reads: Input : 585062 Mapped : 461067 (78.8% of input) of these: 33152 ( 7.2%) have multiple alignments (3782 have >20) Right reads: Input : 585062 Mapped : 456340 (78.0% of input) of these: 33066 ( 7.2%) have multiple alignments (3782 have >20) 78.4% overall read mapping rate. Aligned pairs: 412447 of these: 30002 ( 7.3%) have multiple alignments 3684 ( 0.9%) are discordant alignments 69.9% concordant pair alignment rate.