Left reads: Input : 730652 Mapped : 646787 (88.5% of input) of these: 107828 (16.7%) have multiple alignments (13228 have >20) Right reads: Input : 730652 Mapped : 635151 (86.9% of input) of these: 106508 (16.8%) have multiple alignments (13230 have >20) 87.7% overall read mapping rate. Aligned pairs: 574298 of these: 98373 (17.1%) have multiple alignments 7899 ( 1.4%) are discordant alignments 77.5% concordant pair alignment rate.