Left reads: Input : 447734 Mapped : 377922 (84.4% of input) of these: 15165 ( 4.0%) have multiple alignments (357 have >20) Right reads: Input : 447734 Mapped : 358951 (80.2% of input) of these: 14577 ( 4.1%) have multiple alignments (357 have >20) 82.3% overall read mapping rate. Aligned pairs: 315708 of these: 12853 ( 4.1%) have multiple alignments 8194 ( 2.6%) are discordant alignments 68.7% concordant pair alignment rate.