Left reads: Input : 986399 Mapped : 828894 (84.0% of input) of these: 308414 (37.2%) have multiple alignments (85396 have >20) Right reads: Input : 986399 Mapped : 877014 (88.9% of input) of these: 327603 (37.4%) have multiple alignments (85812 have >20) 86.5% overall read mapping rate. Aligned pairs: 751942 of these: 280684 (37.3%) have multiple alignments 22684 ( 3.0%) are discordant alignments 73.9% concordant pair alignment rate.