Left reads: Input : 380009 Mapped : 322110 (84.8% of input) of these: 10678 ( 3.3%) have multiple alignments (1494 have >20) Right reads: Input : 380009 Mapped : 304448 (80.1% of input) of these: 10038 ( 3.3%) have multiple alignments (1494 have >20) 82.4% overall read mapping rate. Aligned pairs: 270596 of these: 8966 ( 3.3%) have multiple alignments 6215 ( 2.3%) are discordant alignments 69.6% concordant pair alignment rate.