Left reads: Input : 467725 Mapped : 401334 (85.8% of input) of these: 145222 (36.2%) have multiple alignments (39636 have >20) Right reads: Input : 467725 Mapped : 392239 (83.9% of input) of these: 142960 (36.4%) have multiple alignments (39636 have >20) 84.8% overall read mapping rate. Aligned pairs: 346264 of these: 126345 (36.5%) have multiple alignments 15438 ( 4.5%) are discordant alignments 70.7% concordant pair alignment rate.