Left reads: Input : 584049 Mapped : 479787 (82.1% of input) of these: 15319 ( 3.2%) have multiple alignments (457 have >20) Right reads: Input : 584049 Mapped : 484476 (83.0% of input) of these: 15514 ( 3.2%) have multiple alignments (457 have >20) 82.5% overall read mapping rate. Aligned pairs: 413805 of these: 13229 ( 3.2%) have multiple alignments 6908 ( 1.7%) are discordant alignments 69.7% concordant pair alignment rate.