Left reads: Input : 216039 Mapped : 182650 (84.5% of input) of these: 11781 ( 6.5%) have multiple alignments (1363 have >20) Right reads: Input : 216039 Mapped : 173044 (80.1% of input) of these: 11193 ( 6.5%) have multiple alignments (1363 have >20) 82.3% overall read mapping rate. Aligned pairs: 154062 of these: 10199 ( 6.6%) have multiple alignments 2910 ( 1.9%) are discordant alignments 70.0% concordant pair alignment rate.