Left reads: Input : 623296 Mapped : 535699 (85.9% of input) of these: 24507 ( 4.6%) have multiple alignments (2595 have >20) Right reads: Input : 623296 Mapped : 514713 (82.6% of input) of these: 23854 ( 4.6%) have multiple alignments (2595 have >20) 84.3% overall read mapping rate. Aligned pairs: 464383 of these: 21890 ( 4.7%) have multiple alignments 7111 ( 1.5%) are discordant alignments 73.4% concordant pair alignment rate.