Left reads: Input : 328650 Mapped : 274729 (83.6% of input) of these: 23915 ( 8.7%) have multiple alignments (1033 have >20) Right reads: Input : 328650 Mapped : 262416 (79.8% of input) of these: 23280 ( 8.9%) have multiple alignments (1033 have >20) 81.7% overall read mapping rate. Aligned pairs: 230466 of these: 20727 ( 9.0%) have multiple alignments 6287 ( 2.7%) are discordant alignments 68.2% concordant pair alignment rate.