Left reads: Input : 71648 Mapped : 49920 (69.7% of input) of these: 1202 ( 2.4%) have multiple alignments (60 have >20) Right reads: Input : 71648 Mapped : 49001 (68.4% of input) of these: 1142 ( 2.3%) have multiple alignments (60 have >20) 69.0% overall read mapping rate. Aligned pairs: 37730 of these: 810 ( 2.1%) have multiple alignments 927 ( 2.5%) are discordant alignments 51.4% concordant pair alignment rate.