Left reads: Input : 17628025 Mapped : 15524683 (88.1% of input) of these: 768059 ( 4.9%) have multiple alignments (13405 have >20) Right reads: Input : 17628025 Mapped : 13718747 (77.8% of input) of these: 672880 ( 4.9%) have multiple alignments (13381 have >20) 82.9% overall read mapping rate. Aligned pairs: 12895711 of these: 614648 ( 4.8%) have multiple alignments 77989 ( 0.6%) are discordant alignments 72.7% concordant pair alignment rate.