Left reads: Input : 16152281 Mapped : 12805886 (79.3% of input) of these: 604970 ( 4.7%) have multiple alignments (8456 have >20) Right reads: Input : 16152281 Mapped : 11228330 (69.5% of input) of these: 527342 ( 4.7%) have multiple alignments (8456 have >20) 74.4% overall read mapping rate. Aligned pairs: 10386487 of these: 475588 ( 4.6%) have multiple alignments 54444 ( 0.5%) are discordant alignments 64.0% concordant pair alignment rate.