segment_juncs v2.1.1 (ecf7617)
---------------------------
[samopen] SAM header is present: 23 sequences.
Loading reference sequences...
	Loading chr10... done (112626471 bases).
	Loading chr11... done (90463843 bases).
	Loading chr12... done (52716770 bases).
	Loading chr13... done (114033958 bases).
	Loading chr14... done (115493446 bases).
	Loading chr15... done (111246239 bases).
	Loading chr16... done (90668790 bases).
	Loading chr17... done (90843779 bases).
	Loading chr18... done (88201929 bases).
	Loading chr19... done (62275575 bases).
	Loading chr1... done (282763074 bases).
	Loading chr20... done (56205956 bases).
	Loading chr2... done (266435125 bases).
	Loading chr3... done (177699992 bases).
	Loading chr4... done (184226339 bases).
	Loading chr5... done (173707219 bases).
	Loading chr6... done (147991367 bases).
	Loading chr7... done (145729302 bases).
	Loading chr8... done (133307652 bases).
	Loading chr9... done (122095297 bases).
	Loading chrM... done (16313 bases).
	Loading chrX... done (159970021 bases).
	Loading chrY... done (3310458 bases).
>> Performing segment-search:
Loading left segment hits... done.
Loading right segment hits...done.
	found 203300 potential split-segment junctions
	found 11373 potential small deletions
	found 13780 potential small insertions
Reported 203300 total potential splices
Reporting 11373 potential deletions...
Reporting 13780 potential insertions...
Reporting potential fusions...