Left reads: Input : 14229351 Mapped : 11807231 (83.0% of input) of these: 527370 ( 4.5%) have multiple alignments (6836 have >20) Right reads: Input : 14229351 Mapped : 10079302 (70.8% of input) of these: 446206 ( 4.4%) have multiple alignments (6814 have >20) 76.9% overall read mapping rate. Aligned pairs: 9511068 of these: 406914 ( 4.3%) have multiple alignments 51851 ( 0.5%) are discordant alignments 66.5% concordant pair alignment rate.