Left reads: Input : 15732068 Mapped : 13456126 (85.5% of input) of these: 571001 ( 4.2%) have multiple alignments (6353 have >20) Right reads: Input : 15732068 Mapped : 11767579 (74.8% of input) of these: 494313 ( 4.2%) have multiple alignments (6355 have >20) 80.2% overall read mapping rate. Aligned pairs: 11095940 of these: 461035 ( 4.2%) have multiple alignments 51846 ( 0.5%) are discordant alignments 70.2% concordant pair alignment rate.