Left reads: Input : 20653804 Mapped : 17237775 (83.5% of input) of these: 682484 ( 4.0%) have multiple alignments (12406 have >20) Right reads: Input : 20653804 Mapped : 17591470 (85.2% of input) of these: 698805 ( 4.0%) have multiple alignments (12408 have >20) 84.3% overall read mapping rate. Aligned pairs: 15980916 of these: 622409 ( 3.9%) have multiple alignments 82065 ( 0.5%) are discordant alignments 77.0% concordant pair alignment rate.